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BMCBI
2010
108views more  BMCBI 2010»
14 years 12 months ago
Confronting two-pair primer design for enzyme-free SNP genotyping based on a genetic algorithm
Background: Polymerase chain reaction with confronting two-pair primers (PCR-CTPP) method produces allelespecific DNA bands of different lengths by adding four designed primers an...
Cheng-Hong Yang, Yu-Huei Cheng, Li-Yeh Chuang, Hsu...
BMCBI
2005
126views more  BMCBI 2005»
14 years 11 months ago
GANN: Genetic algorithm neural networks for the detection of conserved combinations of features in DNA
Background: The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA struc...
Robert G. Beiko, Robert L. Charlebois
GECCO
2008
Springer
175views Optimization» more  GECCO 2008»
15 years 29 days ago
Using differential evolution for symbolic regression and numerical constant creation
One problem that has plagued Genetic Programming (GP) and its derivatives is numerical constant creation. Given a mathematical formula expressed as a tree structure, the leaf node...
Brian M. Cerny, Peter C. Nelson, Chi Zhou
SAC
2006
ACM
14 years 11 months ago
Challenges in the compilation of a domain specific language for dynamic programming
Many combinatorial optimization problems in biosequence analysis are solved via dynamic programming. To increase programming productivity and program reliability, a domain specifi...
Robert Giegerich, Peter Steffen
PRL
2006
139views more  PRL 2006»
14 years 11 months ago
Evolving color constancy
Objects retain their color in spite of changes in the wavelength and energy composition of the light they reflect. This phenomenon is called color constancy and plays an important ...
Marc Ebner