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» Genetic algorithms using low-discrepancy sequences
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GECCO
2005
Springer
124views Optimization» more  GECCO 2005»
15 years 9 months ago
Evolving petri nets to represent metabolic pathways
Given concentrations of metabolites over a sequence of time steps, the metabolic pathway prediction problem seeks a set of reactions and rate constants for them that could yield t...
Jeremiah Nummela, Bryant A. Julstrom
181
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BMCBI
2004
167views more  BMCBI 2004»
15 years 3 months ago
Feature selection for splice site prediction: A new method using EDA-based feature ranking
Background: The identification of relevant biological features in large and complex datasets is an important step towards gaining insight in the processes underlying the data. Oth...
Yvan Saeys, Sven Degroeve, Dirk Aeyels, Pierre Rou...
141
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SISAP
2010
IEEE
135views Data Mining» more  SISAP 2010»
15 years 1 months ago
Improving the similarity search of tandem mass spectra using metric access methods
In biological applications, the tandem mass spectrometry is a widely used method for determining protein and peptide sequences from an ”in vitro” sample. The sequences are not...
Jiri Novák, Tomás Skopal, David Hoks...
142
Voted
IPPS
2002
IEEE
15 years 8 months ago
Parallel EST Clustering
Expressed sequence tags, abbreviated ESTs, are DNA fragments experimentally derived from expressed portions of genes. Clustering of ESTs is essential for gene recognition and unde...
Anantharaman Kalyanaraman, Srinivas Aluru, Suresh ...
100
Voted
CORR
2008
Springer
71views Education» more  CORR 2008»
15 years 3 months ago
Problem Solving and Complex Systems
The observation and modeling of natural Complex Systems (CSs) like the human nervous system, the evolution or the weather, allows the definition of special abilities and models re...
Frédéric Guinand, Yoann Pigné