Background: The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA struc...
The theory of arrays, introduced by McCarthy in his seminal paper “Toward a mathematical science of computation”, is central to Computer Science. Unfortunately, the theory alo...
In this paper, we present various extensions of Isabelle/HOL by theories that are essential for several formal methods. First, we explain how we have developed an Isabelle/HOL theo...
Set theories are traditionally based on first-order logic. We show that in a constructive setting, basing a set theory on a dependent logic yields many benefits. To this end, we...
We consider the problem of providing formal support for working tract syntax involving variable binders. Gabbay and Pitts have shown in their work on Fraenkel-Mostowski (FM) set th...