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GECCO
2005
Springer
178views Optimization» more  GECCO 2005»
15 years 3 months ago
A co-evolutionary hybrid algorithm for multi-objective optimization of gene regulatory network models
In this paper, the parameters of a genetic network for rice flowering time control have been estimated using a multiobjective genetic algorithm approach. We have modified the rece...
Praveen Koduru, Sanjoy Das, Stephen Welch, Judith ...
BIBE
2009
IEEE
185views Bioinformatics» more  BIBE 2009»
15 years 2 months ago
Anomaly-free Prediction of Gene Ontology Annotations Using Bayesian Networks
Gene and protein structural and functional annotations expressed through controlled terminologies and ontologies are paramount especially for the aim of inferring new biomedical k...
Marco Tagliasacchi, Marco Masseroli
CIBCB
2007
IEEE
15 years 1 months ago
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Ji He, Xinbin Dai, Xuechun Zhao
IJBRA
2008
63views more  IJBRA 2008»
14 years 9 months ago
Protein cavity clustering based on community structure of pocket similarity network
: Functions of a protein are mainly determined by its structure. Surface cavities, also called pockets or clefts, are ordinarily regarded as potentially active sites where the prot...
Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zh...
BIOINFORMATICS
2007
88views more  BIOINFORMATICS 2007»
14 years 10 months ago
Maximum likelihood of phylogenetic networks
Horizontal gene transfer (HGT) is believed to be ubiquitous among bacteria, and plays a major role in their genome diversification as well as their ability to develop resistance t...
Guohua Jin, Luay Nakhleh, Sagi Snir, Tamir Tuller