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» Genomic data visualization on the Web
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CHI
2009
ACM
15 years 10 months ago
What do you see when you're surfing?: using eye tracking to predict salient regions of web pages
An understanding of how people allocate their visual attention when viewing Web pages is very important for Web authors, interface designers, advertisers and others. Such knowledg...
Georg Buscher, Edward Cutrell, Meredith Ringel Mor...
NAR
2010
184views more  NAR 2010»
14 years 4 months ago
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes
The RegPrecise database (http://regprecise.lbl.gov) was developed for capturing, visualization and analysis of predicted transcription factor regulons in prokaryotes that were rec...
Pavel S. Novichkov, Olga N. Laikova, Elena S. Novi...
BMCBI
2005
169views more  BMCBI 2005»
14 years 9 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
BMCBI
2006
145views more  BMCBI 2006»
14 years 9 months ago
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes
Background: Successful realization of a "systems biology" approach to analyzing cells is a grand challenge for our understanding of life. However, current modeling appro...
Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yo...
SIGMOD
2009
ACM
139views Database» more  SIGMOD 2009»
15 years 10 months ago
Vispedia: on-demand data integration for interactive visualization and exploration
Wikipedia is an example of the large, collaborative, semi-structured data sets emerging on the Web. Typically, before these data sets can be used, they must transformed into struc...
Bryan Chan, Justin Talbot, Leslie Wu, Nathan Sakun...