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BMCBI
2011
14 years 1 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
BMCBI
2008
169views more  BMCBI 2008»
14 years 10 months ago
MausDB: An open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects
Background: Large-scale, comprehensive and standardized high-throughput mouse phenotyping has been established as a tool of functional genome research by the German Mouse Clinic a...
Holger Maier, Christoph Lengger, Bruno Simic, Helm...
ESWA
2008
292views more  ESWA 2008»
14 years 10 months ago
Web mining based on Growing Hierarchical Self-Organizing Maps: Analysis of a real citizen web portal
This work is focused on the usage analysis of a citizen web portal, Infoville XXI (http://www.infoville.es) by means of Self-Organizing Maps (SOM). In this paper, a variant of the...
Antonio Soriano-Asensi, José David Mart&iac...
BMCBI
2007
173views more  BMCBI 2007»
14 years 10 months ago
Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is a high-throughput assay for DNA-protein-binding or post-translational chromatin/histone modi...
Joern Toedling, Oleg Sklyar, Tammo Krueger, Jenny ...
WWW
2007
ACM
15 years 10 months ago
Towards domain-independent information extraction from web tables
Traditionally, information extraction from web tables has focused on small, more or less homogeneous corpora, often based on assumptions about the use of <table> tags. A mul...
Bernhard Krüpl, Bernhard Pollak, Marcus Herzo...