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NC
2006
132views Neural Networks» more  NC 2006»
15 years 4 months ago
Learning short multivariate time series models through evolutionary and sparse matrix computation
Multivariate Time Series (MTS) data are widely available in different fields including medicine, finance, bioinformatics, science and engineering. Modelling MTS data accurately is...
Stephen Swift, Joost N. Kok, Xiaohui Liu
WABI
2007
Springer
139views Bioinformatics» more  WABI 2007»
15 years 10 months ago
Computability of Models for Sequence Assembly
Graph-theoretic models have come to the forefront as some of the most powerful and practical methods for sequence assembly. Simultaneously, the computational hardness of the underl...
Paul Medvedev, Konstantinos Georgiou, Gene Myers, ...
PROCEDIA
2010
154views more  PROCEDIA 2010»
14 years 11 months ago
Parallel computation of phylogenetic consensus trees
The field of bioinformatics is witnessing a rapid and overwhelming accumulation of molecular sequence data, predominantly driven by novel wet-lab sequencing techniques. This trend...
Andre J. Aberer, Nicholas D. Pattengale, Alexandro...
ISB
2002
140views more  ISB 2002»
15 years 4 months ago
Computer system "Gene Discovery" for promoter structure analysis
Data Mining and Knowledge Discovery techniques proved to be efficient tools for variety of complex tasks in biology including DNA research. This paper presents implementation of th...
Eugenii E. Vityaev, Yuri L. Orlov, Oleg V. Vishnev...
DAC
2007
ACM
16 years 5 months ago
RQL: Global Placement via Relaxed Quadratic Spreading and Linearization
This paper describes a simple and effective quadratic placement algorithm called RQL. We show that a good quadratic placement, followed by local wirelength-driven spreading can pr...
Natarajan Viswanathan, Gi-Joon Nam, Charles J. Alp...