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CCE
2005
15 years 4 months ago
Use of parallel computers in rational design of redundant sensor networks
A general method to design optimal redundant sensor network even in the case of one sensor failure and able to estimate process key parameters within a required accuracy is propos...
Carine Gerkens, Georges Heyen
RECOMB
2010
Springer
15 years 11 months ago
Alignment-Free Phylogenetic Reconstruction
We introduce the first polynomial-time phylogenetic reconstruction algorithm under a model of sequence evolution allowing insertions and deletions—or indels. Given appropriate ...
Constantinos Daskalakis, Sébastien Roch
ASAP
2007
IEEE
122views Hardware» more  ASAP 2007»
15 years 11 months ago
Parallelizing HMMER for Hardware Acceleration on FPGAs
Profile based Hidden Markov Model is a widely used tool in bioinformatics. While being very valuable to biologists, it is extremely compute intensive and suffers from prohibitive...
Steven Derrien, Patrice Quinton
FUZZIEEE
2007
IEEE
15 years 11 months ago
On Using Fuzzy Contact Maps for Protein Structure Comparison
The comparison of protein structures is an important problem in Bioinformatics, and Soft Computing techniques were recently introduced for achieving a better representation and po...
Juan Ramón González, David A. Pelta
DNA
2007
Springer
127views Bioinformatics» more  DNA 2007»
15 years 10 months ago
Discrete Simulations of Biochemical Dynamics
Abstract. Metabolic P systems, shortly MP systems, are a special class of P systems, introduced for expressing biological metabolism. Their dynamics are computed by metabolic algor...
Vincenzo Manca