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PROCEDIA
2010
138views more  PROCEDIA 2010»
14 years 6 months ago
Using the reconfigurable massively parallel architecture COPACOBANA 5000 for applications in bioinformatics
Currently several computational problems require high processing power to handle huge amounts of data, although underlying core algorithms appear to be rather simple. Especially i...
Lars Wienbrandt, Stefan Baumgart, Jost Bissel, Car...
ESCIENCE
2006
IEEE
15 years 5 months ago
Grid Approach to Embarrassingly Parallel CPU-Intensive Bioinformatics Problems
Bioinformatics algorithms such as sequence alignment methods based on profile-HMM (Hidden Markov Model) are popular but CPU-intensive. If large amounts of data are processed, a s...
Heinz Stockinger, Marco Pagni, Lorenzo Cerutti, La...
AUSAI
2006
Springer
15 years 1 months ago
An Efficient Alternative to SVM Based Recursive Feature Elimination with Applications in Natural Language Processing and Bioinfo
The SVM based Recursive Feature Elimination (RFE-SVM) algorithm is a popular technique for feature selection, used in natural language processing and bioinformatics. Recently it wa...
Justin Bedo, Conrad Sanderson, Adam Kowalczyk
IPPS
2008
IEEE
15 years 6 months ago
Supporting high performance bioinformatics flat-file data processing using indices
As an essential part of in vitro analysis, biological database query has become more and more important in the research process. A few challenges that are specific to bioinformat...
Xuan Zhang, Gagan Agrawal
GI
2008
Springer
15 years 26 days ago
Semantically linking web pages to web services in Bioinformatics
: A key application area of semantic technologies is the fast-developing field of bioinformatics. Sealife is a project within this field with the aim of creating semanticsbased w...
Karen Sutherland, Kenneth McLeod, Albert Burger