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ICIC
2009
Springer
16 years 18 days ago
A Method for Multiple Sequence Alignment Based on Particle Swarm Optimization
Sequence Alignment is a basic information disposal method in Bioinformatics. However, it is difficult to deal with multiple sequence alignment problem(MSA). In this paper, an impro...
Fasheng Xu, Yuehui Chen
ICNSC
2008
IEEE
16 years 14 days ago
Multiple Sequence Alignment Based on Genetic Algorithms with Reserve Selection
— This paper presents an approach to the multiple sequence alignment (MSA) problem by applying genetic algorithms with a reserve selection mechanism. MSA is one of the most funda...
Yang Chen, Jinglu Hu, Kotaro Hirasawa, Songnian Yu
CCGRID
2006
IEEE
16 years 3 days ago
SAHA: A Scheduling Algorithm for Security-Sensitive Jobs on Data Grids
Security-sensitive applications that access and generate large data sets are emerging in various areas such as bioinformatics and high energy physics. Data grids provide data-inte...
Tao Xie 0004, Xiao Qin
ICPPW
2006
IEEE
16 years 2 days ago
Grid Resource Allocation and Task Scheduling for Resource Intensive Applications
Evolution of grid has drawn attention from various resource intensive applications addressing domains of bio-informatics, astrology and multimedia, to name a few. Image analysis a...
Abdul Aziz, Hesham El-Rewini
WABI
2005
Springer
109views Bioinformatics» more  WABI 2005»
15 years 11 months ago
Optimal Protein Threading by Cost-Splitting
Abstract. In this paper, we use integer programming approach for solving a hard combinatorial optimization problem, namely protein threading. For this sequence-to-structure alignme...
Philippe Veber, Nicola Yanev, Rumen Andonov, Vince...