: Genome annotation relies to a large extent on the recognition of homologs to already known genes. The starting point for such protocols is a collection of known sequences from on...
RNA structure prediction, or folding, is a computeintensive task that lies at the core of several search applications in bioinformatics. We begin to address the need for high-thro...
Arpith C. Jacob, Jeremy Buhler, Roger D. Chamberla...
We present an interactive discovery support system, which for a given starting concept of interest, discovers new, potentially meaningful relations with other concepts that have no...
When aligning biological sequences, the choice of parameter values for the alignment scoring function is critical. Small changes in gap penalties, for example, can yield radically ...
The optimal transformation of one tree into another by means of elementary edit operations is an important algorithmic problem that has several interesting applications to computat...
Antoni Lozano, Ron Y. Pinter, Oleg Rokhlenko, Gabr...