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GECCO
2006
Springer
133views Optimization» more  GECCO 2006»
15 years 9 months ago
String transformation-based Bayesian classification or proteins
We describe a Markov chain Bayesian classification tool, SCS, that can perform data-driven classification of proteins and protein segments. Training data for interesting classific...
Timothy Meekhof, Gary W. Daughdrill, Robert B. Hec...
EUROGP
2008
Springer
135views Optimization» more  EUROGP 2008»
15 years 8 months ago
Using Genetic Programming for Turing Machine Induction
Abstract. Turing machines are playing an increasingly significant role in Computer Science domains such as bioinformatics. Instead of directly formulating a solution to a problem, ...
Amashini Naidoo, Nelishia Pillay
147
Voted
ACL
2006
15 years 7 months ago
A Bio-Inspired Approach for Multi-Word Expression Extraction
This paper proposes a new approach for Multi-word Expression (MWE)extraction on the motivation of gene sequence alignment because textual sequence is similar to gene sequence in p...
Jianyong Duan, Ruzhan Lu, Weilin Wu, Yi Hu, Yan Ti...
WOB
2004
134views Bioinformatics» more  WOB 2004»
15 years 7 months ago
Reconstruction of Phylogenetic Trees using the Ant Colony Optimization Paradigm
We developed a new approach for the reconstruction of phylogenetic trees using ant colony optimization metaheuristics.Atree is constructed using a fully connected graph and the pro...
Heitor S. Lopes, Mauricio Perretto
155
Voted
BMCBI
2008
121views more  BMCBI 2008»
15 years 6 months ago
A simple and fast heuristic for protein structure comparison
Background: Protein structure comparison is a key problem in bioinformatics. There exist several methods for doing protein comparison, being the solution of the Maximum Contact Ma...
David A. Pelta, Juan Ramón González,...