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BIBE
2006
IEEE
119views Bioinformatics» more  BIBE 2006»
16 years 10 days ago
Large Grain Size Stochastic Optimization Alignment
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
Perry Ridge, Hyrum Carroll, Dan Sneddon, Mark J. C...
CEC
2005
IEEE
15 years 12 months ago
Multiobjective clustering around medoids
Abstract- The large majority of existing clustering algorithms are centered around the notion of a feature, that is, individual data items are represented by their intrinsic proper...
Julia Handl, Joshua D. Knowles
CSB
2005
IEEE
119views Bioinformatics» more  CSB 2005»
15 years 12 months ago
Temperature and Mutation Switches in the Secondary Structure of Small RNAs
Conformational switching in the secondary structure of RNAs has recently attracted considerable attention, fostered by the discovery of ‘riboswitches’ in living organisms. The...
Assaf Avihoo, Danny Barash
CSB
2005
IEEE
146views Bioinformatics» more  CSB 2005»
15 years 12 months ago
Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data
A good number of biclustering algorithms have been proposed for grouping gene expression data. Many of them have adopted matrix norms to define the similarity score of a bicluste...
Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos
DNA
2000
Springer
132views Bioinformatics» more  DNA 2000»
15 years 10 months ago
Engineered Communications for Microbial Robotics
Multicellular organisms create complex patterned structures from identical, unreliable components. Learning how to engineer such robust behavior is important to both an improved un...
Ron Weiss, Thomas F. Knight Jr.