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119
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BIOINFORMATICS
2006
130views more  BIOINFORMATICS 2006»
15 years 3 months ago
Memory efficient folding algorithms for circular RNA secondary structures
A small class of RNA molecules, in particular the tiny genomes of viroids, are circular. Yet most structure prediction algorithms handle only linear RNAs. The most straightforward ...
Ivo L. Hofacker, Peter F. Stadler
146
Voted
SIAMMAX
2010
189views more  SIAMMAX 2010»
14 years 10 months ago
Fast Algorithms for the Generalized Foley-Sammon Discriminant Analysis
Linear Discriminant Analysis (LDA) is one of the most popular approaches for feature extraction and dimension reduction to overcome the curse of the dimensionality of the high-dime...
Lei-Hong Zhang, Li-Zhi Liao, Michael K. Ng
126
Voted
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
15 years 9 months ago
A Pivoting Algorithm for Metabolic Networks in the Presence of Thermodynamic Constraints
A linear programming algorithm is presented to constructively compute thermodynamically feasible fluxes and change in chemical potentials of reactions for a metabolic network. It...
R. Nigam, S. Liang
122
Voted
DNA
2001
Springer
164views Bioinformatics» more  DNA 2001»
15 years 8 months ago
A Clause String DNA Algorithm for SAT
A DNA algorithm for SAT, the satisfiability of propositional formulae, is presented where the number of separation steps is given by the number of clauses of the instance. This re...
Vincenzo Manca, Claudio Zandron