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» Graph Annotations in Modeling Complex Network Topologies
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BMCBI
2005
156views more  BMCBI 2005»
14 years 9 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
WAW
2009
Springer
138views Algorithms» more  WAW 2009»
15 years 4 months ago
Information Theoretic Comparison of Stochastic Graph Models: Some Experiments
The Modularity-Q measure of community structure is known to falsely ascribe community structure to random graphs, at least when it is naively applied. Although Q is motivated by a ...
Kevin J. Lang
CN
2002
98views more  CN 2002»
14 years 9 months ago
New models and algorithms for programmable networks
In todays IP networks most of the network control and management tasks are performed at the end points. As a result, many important network functions cannot be optimized due to la...
Danny Raz, Yuval Shavitt
BMCBI
2011
14 years 4 months ago
Properties of Metabolic Graphs: Biological Organization or Representation Artifacts?
Background: Standard graphs, where each edge links two nodes, have been extensively used to represent the connectivity of metabolic networks. It is based on this representation th...
Wanding Zhou, Luay Nakhleh
CCR
2008
86views more  CCR 2008»
14 years 9 months ago
An Integrated Model of Traffic, Geography and Economy in the Internet
Modeling Internet growth is important both for understanding the current network and to predict and improve its future. To date, Internet models have typically attempted to explai...
Petter Holme, Josh Karlin, Stephanie Forrest