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BMCBI
2008
228views more  BMCBI 2008»
14 years 10 months ago
Adaptive diffusion kernel learning from biological networks for protein function prediction
Background: Machine-learning tools have gained considerable attention during the last few years for analyzing biological networks for protein function prediction. Kernel methods a...
Liang Sun, Shuiwang Ji, Jieping Ye
CIDM
2009
IEEE
15 years 1 months ago
Empirical comparison of graph classification algorithms
The graph classification problem is learning to classify separate, individual graphs in a graph database into two or more categories. A number of algorithms have been introduced fo...
Nikhil S. Ketkar, Lawrence B. Holder, Diane J. Coo...
ICPR
2008
IEEE
15 years 4 months ago
Semi-supervised learning by locally linear embedding in kernel space
Graph based semi-supervised learning methods (SSL) implicitly assume that the intrinsic geometry of the data points can be fully specified by an Euclidean distance based local ne...
Rujie Liu, Yuehong Wang, Takayuki Baba, Daiki Masu...
NIPS
2008
14 years 11 months ago
Bayesian Network Score Approximation using a Metagraph Kernel
Many interesting problems, including Bayesian network structure-search, can be cast in terms of finding the optimum value of a function over the space of graphs. However, this fun...
Benjamin Yackley, Eduardo Corona, Terran Lane
NIPS
2004
14 years 11 months ago
An Application of Boosting to Graph Classification
This paper presents an application of Boosting for classifying labeled graphs, general structures for modeling a number of real-world data, such as chemical compounds, natural lan...
Taku Kudo, Eisaku Maeda, Yuji Matsumoto