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» Graph Mining based on a Data Partitioning Approach
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BMCBI
2010
223views more  BMCBI 2010»
14 years 7 months ago
MetNetGE: interactive views of biological networks and ontologies
Background: Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large...
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin ...
BMCBI
2008
138views more  BMCBI 2008»
15 years 14 days ago
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions
Background: Quantitative characterization of the topological characteristics of protein-protein interaction (PPI) networks can enable the elucidation of biological functional modu...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
POPL
2007
ACM
16 years 20 days ago
Cork: dynamic memory leak detection for garbage-collected languages
A memory leak in a garbage-collected program occurs when the program inadvertently maintains references to objects that it no longer needs. Memory leaks cause systematic heap grow...
Maria Jump, Kathryn S. McKinley
BMCBI
2007
146views more  BMCBI 2007»
15 years 14 days ago
Spatial location and its relevance for terminological inferences in bio-ontologies
Background: An adequate and expressive ontological representation of biological organisms and their parts requires formal reasoning mechanisms for their relations of physical aggr...
Stefan Schulz, Kornél G. Markó, Udo ...
SIGMOD
2012
ACM
212views Database» more  SIGMOD 2012»
13 years 2 months ago
Local structure and determinism in probabilistic databases
While extensive work has been done on evaluating queries over tuple-independent probabilistic databases, query evaluation over correlated data has received much less attention eve...
Theodoros Rekatsinas, Amol Deshpande, Lise Getoor