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BMCBI
2006
114views more  BMCBI 2006»
14 years 9 months ago
BLISS: biding site level identification of shared signal-modules in DNA regulatory sequences
Background: Regulatory modules are segments of the DNA that control particular aspects of gene expression. Their identification is therefore of great importance to the field of mo...
Hailong Meng, Arunava Banerjee, Lei Zhou
BMCBI
2006
147views more  BMCBI 2006»
14 years 9 months ago
Grouping Gene Ontology terms to improve the assessment of gene set enrichment in microarray data
Background: Gene Ontology (GO) terms are often used to assess the results of microarray experiments. The most common way to do this is to perform Fisher's exact tests to find...
Alex Lewin, Ian C. Grieve
NAR
2002
138views more  NAR 2002»
14 years 9 months ago
The KEGG databases at GenomeNet
The Kyoto Encyclopedia of Genes and Genomes (KEGG) is the primary database resource of the Japanese GenomeNet service (http://www.genome.ad.jp/) for understanding higher order fun...
Minoru Kanehisa, Susumu Goto, Shuichi Kawashima, A...
ICDM
2007
IEEE
175views Data Mining» more  ICDM 2007»
15 years 3 months ago
gApprox: Mining Frequent Approximate Patterns from a Massive Network
Recently, there arise a large number of graphs with massive sizes and complex structures in many new applications, such as biological networks, social networks, and the Web, deman...
Chen Chen, Xifeng Yan, Feida Zhu, Jiawei Han
67
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BMCBI
2010
100views more  BMCBI 2010»
14 years 9 months ago
Efficiency clustering for low-density microarrays and its application to QPCR
Background: Pathway-targeted or low-density arrays are used more and more frequently in biomedical research, particularly those arrays that are based on quantitative real-time PCR...
Eric F. Lock, Ryan Ziemiecki, J. S. Marron, Dirk P...