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BIBM
2010
IEEE
157views Bioinformatics» more  BIBM 2010»
15 years 1 months ago
Decomposing PPI networks for complex discovery
Abstract--Protein complexes are important for understanding principles of cellular organization and functions. With the availability of large amounts of high-throughput proteinprot...
Guimei Liu, Chern Han Yong, Limsoon Wong, Hon Nian...
SIAMNUM
2011
161views more  SIAMNUM 2011»
14 years 10 months ago
A Convergent Finite Volume Scheme for Diffusion on Evolving Surfaces
Abstract. A finite volume scheme for transport and diffusion problems on evolving hypersurfaces is discussed. The underlying motion is assumed to be described by a fixed, not ne...
Martin Lenz, Simplice Firmin Nemadjieu, Martin Rum...
JSS
2011
150views more  JSS 2011»
14 years 10 months ago
A novel general framework for automatic and cost-effective handling of recoverable temporal violations in scientific workflow sy
Due to the complex nature of scientific workflow environments, temporal violations often take place and may severely reduce the timeliness of the execution’s results. To handle ...
Xiao Liu, Zhiwei Ni, Zhangjun Wu, Dong Yuan, Jinju...
BMCBI
2011
14 years 7 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
POPL
2009
ACM
16 years 4 months ago
Modular code generation from synchronous block diagrams: modularity vs. code size
We study modular, automatic code generation from hierarchical block diagrams with synchronous semantics. Such diagrams are the fundamental model behind widespread tools in the emb...
Roberto Lublinerman, Christian Szegedy, Stavros Tr...