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BMCBI
2006
122views more  BMCBI 2006»
14 years 12 months ago
BioMoby extensions to the Taverna workflow management and enactment software
Background: As biology becomes an increasingly computational science, it is critical that we develop software tools that support not only bioinformaticians, but also bench biologi...
Edward A. Kawas, Martin Senger, Mark D. Wilkinson
BMCBI
2006
155views more  BMCBI 2006»
14 years 12 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
DPD
2006
141views more  DPD 2006»
14 years 12 months ago
Efficient parallel processing of range queries through replicated declustering
A common technique used to minimize I/O in data intensive applications is data declustering over parallel servers. This technique involves distributing data among several disks so...
Hakan Ferhatosmanoglu, Ali Saman Tosun, Guadalupe ...
BMCBI
2007
126views more  BMCBI 2007»
14 years 12 months ago
Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
Background: Biochemical investigations over the last decades have elucidated an increasingly complete image of the cellular metabolism. To derive a systems view for the regulation...
Gunnar Schramm, Marc Zapatka, Roland Eils, Rainer ...
CORR
2007
Springer
132views Education» more  CORR 2007»
14 years 11 months ago
On Compact Routing for the Internet
The Internet’s routing system is facing stresses due to its poor fundamental scaling properties. Compact routing is a research field that studies fundamental limits of routing ...
Dmitri V. Krioukov, Kimberly C. Claffy, Kevin R. F...