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» HESAS: HERVs Expression and Structure Analysis System
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PLDI
2004
ACM
15 years 3 months ago
Jedd: a BDD-based relational extension of Java
In this paper we present Jedd, a language extension to Java that supports a convenient way of programming with Binary Decision Diagrams (BDDs). The Jedd language abstracts BDDs as...
Ondrej Lhoták, Laurie J. Hendren
BMCBI
2010
164views more  BMCBI 2010»
14 years 7 months ago
Merged consensus clustering to assess and improve class discovery with microarray data
Background: One of the most commonly performed tasks when analysing high throughput gene expression data is to use clustering methods to classify the data into groups. There are a...
T. Ian Simpson, J. Douglas Armstrong, Andrew P. Ja...
ICFP
2005
ACM
15 years 10 months ago
PolyAML: a polymorphic aspect-oriented functional programming language
This paper defines PolyAML, a typed functional, aspect-oriented programming language. The main contribution of PolyAML is the seamless integration of polymorphism, run-time type a...
Daniel S. Dantas, David Walker, Geoffrey Washburn,...
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ICDM
2006
IEEE
176views Data Mining» more  ICDM 2006»
15 years 4 months ago
Razor: mining distance-constrained embedded subtrees
Due to their capability for expressing semantics and relationships among data objects, semi-structured documents have become a common way of representing domain knowledge. Compari...
Henry Tan, Tharam S. Dillon, Fedja Hadzic, Elizabe...
BMCBI
2010
191views more  BMCBI 2010»
14 years 5 months ago
Molecular dynamics simulation studies and in vitro site directed mutagenesis of avian beta-defensin Apl_AvBD2
Background: Defensins comprise a group of antimicrobial peptides, widely recognized as important elements of the innate immune system in both animals and plants. Cationicity, rath...
Soja Saghar Soman, Krishnankutty Chandrika Sivakum...