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» HYPE Applied to the Modelling of Hybrid Biological Systems
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BMCBI
2007
173views more  BMCBI 2007»
14 years 12 months ago
Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model
Background: Modelling of time series data should not be an approximation of input data profiles, but rather be able to detect and evaluate dynamical changes in the time series dat...
Ryoko Morioka, Shigehiko Kanaya, Masami Y. Hirai, ...
BMCBI
2004
185views more  BMCBI 2004»
14 years 11 months ago
Linear fuzzy gene network models obtained from microarray data by exhaustive search
Background: Recent technological advances in high-throughput data collection allow for experimental study of increasingly complex systems on the scale of the whole cellular genome...
Bahrad A. Sokhansanj, J. Patrick Fitch, Judy N. Qu...
CAINE
2007
15 years 1 months ago
Parameter Estimation via Analysis of Fuzzy Clusters (PEAF): An Algorithm to Estimate Parameters of Agent-Based Models
Biologically focused, agent-based models need many parameters in order to simulate system dynamics. It is often essential to explore the consequences of many parameter vectors bef...
Shahab Sheikh-Bahaei, C. Anthony Hunt
ENTCS
2010
127views more  ENTCS 2010»
14 years 12 months ago
Combining Model Reductions
Molecular biological models usually suffer from a large combinatorial explosion. Indeed, proteins form complexes and modify each others, which leads to the formation of a huge num...
Ferdinanda Camporesi, Jérôme Feret, H...
AH
2006
Springer
15 years 3 months ago
eDAADe: An Adaptive Recommendation System for Comparison and Analysis of Architectural Precedents
We built a Web-based adaptive recommendation system for students to select and suggest architectural cases when they analyze "Case Study" work within the architectural de...
Shu-Feng Pan, Ji-Hyun Lee