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» Haplotype reconstruction from SNP alignment

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RECOMB
2003
Springer

103views Computational Biology» more RECOMB 2003»

Haplotype reconstruction from SNP alignment

15 years 10 months ago

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In this paper, we describe a method for statistical reconstruction of haplotypes from a set of aligned SNP fragments. We consider the case of a pair of homologous human chromosome...

Lei Li, Jong Hyun Kim, Michael S. Waterman

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CANDC
2005
ACM

109views Emerging Technology» more CANDC 2005»

Haplotype assembly from aligned weighted SNP fragments

14 years 10 months ago

Download madis1.iss.ac.cn

Given an assembled genome of a diploid organism the haplotype assembly problem can be formulated as retrieval of a pair of haplotypes from a set of aligned weighted SNP fragments....

Yu-Ying Zhao, Ling-Yun Wu, Ji-Hong Zhang, Rui-Shen...

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ALGORITHMICA
2007

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The Complexity of the Single Individual SNP Haplotyping Problem

14 years 10 months ago

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— We present several new results pertaining to haplotyping. These results concern the combinatorial problem of reconstructing haplotypes from incomplete and/or imperfectly sequen...

Rudi Cilibrasi, Leo van Iersel, Steven Kelk, John ...

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APBC
2008

232views Bioinformatics» more APBC 2008»

Linear Time Probabilistic Algorithms for the Singular Haplotype Reconstruction Problem from SNP Fragments

14 years 11 months ago

Download www.comp.nus.edu.sg

Zhixiang Chen, Bin Fu, Robert T. Schweller, Boting...

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