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» Hardening Functions for Large Scale Distributed Computations
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JPDC
2006
112views more  JPDC 2006»
15 years 4 months ago
Large scale multiple sequence alignment with simultaneous phylogeny inference
Multiple sequence alignment (MSA) and phylogenetic tree reconstruction are one of the most important problems in the computational biology. While both these problems are of great ...
Gilles Parmentier, Denis Trystram, Jaroslaw Zola
GCB
1997
Springer
77views Biometrics» more  GCB 1997»
15 years 8 months ago
Statistics of large scale sequence searching
Motivation: Database search programs such as FASTA, BLAST or a rigorous Smith–Waterman algorithm produce lists of database entries, which are assumed to be related to the query....
Rainer Spang, Martin Vingron
DSN
2005
IEEE
15 years 6 months ago
A Spatial Fluid-Based Framework to Analyze Large-Scale Wireless Sensor Networks
The behavior of large-scale wireless sensor networks has been shown to be surprisingly complex and difficult to analyze, both by empirical experiment and simulation. In this pape...
Marco Gribaudo, Carla-Fabiana Chiasserini, Rossano...
GRID
2004
Springer
15 years 10 months ago
High Performance Threaded Data Streaming for Large Scale Simulations
We have developed a threaded parallel data streaming approach using Logistical Networking (LN) to transfer multi-terabyte simulation data from computers at NERSC to our local anal...
Viraj Bhat, Scott Klasky, Scott Atchley, Micah Bec...
IPPS
2009
IEEE
15 years 11 months ago
Power-aware load balancing of large scale MPI applications
Power consumption is a very important issue for HPC community, both at the level of one application or at the level of whole workload. Load imbalance of a MPI application can be e...
Maja Etinski, Julita Corbalán, Jesús...