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BMCBI
2006
143views more  BMCBI 2006»
14 years 9 months ago
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction
Background: One of the most powerful methods for the prediction of protein structure from sequence information alone is the iterative construction of profile-type models. Because ...
Eric D. Scheeff, Philip E. Bourne
BMCBI
2005
87views more  BMCBI 2005»
14 years 9 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
BMCBI
2005
114views more  BMCBI 2005»
14 years 9 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
PR
2008
124views more  PR 2008»
14 years 9 months ago
A daily behavior enabled hidden Markov model for human behavior understanding
This paper presents a Hierarchical Context Hidden Markov Model (HC-HMM) for behavior understanding from video streams in a nursing center. The proposed HC-HMM infers elderly behav...
Pau-Choo Chung, Chin-De Liu
BMCBI
2010
99views more  BMCBI 2010»
14 years 9 months ago
Prediction of novel precursor miRNAs using a context-sensitive hidden Markov model (CSHMM)
Background: It has been apparent in the last few years that small non coding RNAs (ncRNA) play a very significant role in biological regulation. Among these microRNAs (miRNAs), 22...
Sumeet Agarwal, Candida Vaz, Alok Bhattacharya, As...