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BMCBI
2011
14 years 6 months ago
Hierarchical graphs for rule-based modeling of biochemical systems
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
Nathan W. Lemons, Bin Hu, William S. Hlavacek
BIRTHDAY
2005
Springer
15 years 5 months ago
Graph Transformation with Variables
Abstract. Variables make rule-based systems more abstract and expressive, as witnessed by term rewriting systems and two-level grammars. In this paper we show that variables can be...
Berthold Hoffmann
ECEASST
2008
95views more  ECEASST 2008»
14 years 11 months ago
Graph Transformations for the Resource Description Framework
: The Resource Description Framework (RDF) is a standard developed by the World Wide Web Consortium (W3C) to facilitate the representation and exchange of structured (meta-)data in...
Benjamin Braatz, Christoph Brandt
CORR
2010
Springer
178views Education» more  CORR 2010»
14 years 10 months ago
Towards A Shape Analysis for Graph Transformation Systems
Graphs and graph transformation systems are a frequently used modelling technique for a wide range of different domains, covering areas as diverse as refactorings, network topolog...
Dominik Steenken, Heike Wehrheim, Daniel Wonisch
AMW
2011
14 years 3 months ago
SNQL: A Social Networks Query and Transformation Language
Abstract. Social Network (SN) data has become ubiquitous, demanding advanced and flexible means to represent, transform and query such data. In addition to the intrinsic challenge...
Mauro San Martín, Claudio Gutierrez, Peter ...