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BMCBI
2011
14 years 7 months ago
PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Background: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorith...
Xin Feng, Robert Grossman, Lincoln Stein
SIGCOMM
2010
ACM
15 years 4 months ago
Symbiotic routing in future data centers
Building distributed applications for data centers is hard. CamCube explores whether replacing the traditional switchbased network with a directly connected topology makes it easi...
Hussam Abu-Libdeh, Paolo Costa, Antony I. T. Rowst...
149
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IPPS
2008
IEEE
15 years 10 months ago
Data throttling for data-intensive workflows
— Existing workflow systems attempt to achieve high performance by intelligently scheduling tasks on resources, sometimes even attempting to move the largest data files on the hi...
Sang-Min Park, Marty Humphrey
HPDC
2010
IEEE
15 years 5 months ago
Mendel: efficiently verifying the lineage of data modified in multiple trust domains
Data is routinely created, disseminated, and processed in distributed systems that span multiple administrative domains. To maintain accountability while the data is transformed b...
Ashish Gehani, Minyoung Kim
CIKM
2011
Springer
14 years 3 months ago
LogSig: generating system events from raw textual logs
Modern computing systems generate large amounts of log data. System administrators or domain experts utilize the log data to understand and optimize system behaviors. Most system ...
Liang Tang, Tao Li, Chang-Shing Perng