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ICCS
2001
Springer
15 years 7 months ago
Computational Design and Performance of the Fast Ocean Atmosphere Model, Version One
The Fast Ocean Atmosphere Model (FOAM) is a climate system model intended for application to climate science questions that require long simulations. FOAM is a distributed-memory p...
Robert L. Jacob, Chad Schafer, Ian T. Foster, Mich...
130
Voted
IPPS
2005
IEEE
15 years 8 months ago
High-Performance Direct Pairwise Comparison of Large Genomic Sequences
Many applications in Comparative Genomics lend themselves to implementations that take advantage of common high-performance features in modern microprocessors. However, the common...
Christopher Mueller, Mehmet M. Dalkilic, Andrew Lu...
132
Voted
EUROPAR
2005
Springer
15 years 8 months ago
PerfMiner: Cluster-Wide Collection, Storage and Presentation of Application Level Hardware Performance Data
Abstract. We present PerfMiner, a system for the transparent collection, storage and presentation of thread-level hardware performance data across an entire cluster. Every sub-proc...
Philip Mucci, Daniel Ahlin, Johan Danielsson, Per ...
144
Voted
ICPPW
2009
IEEE
15 years 10 days ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
125
Voted
ICPPW
2006
IEEE
15 years 8 months ago
Multiple Flows of Control in Migratable Parallel Programs
Many important parallel applications require multiple flows of control to run on a single processor. In this paper, we present a study of four flow-of-control mechanisms: proces...
Gengbin Zheng, Laxmikant V. Kalé, Orion Sky...