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» High-performance computing using accelerators
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IPPS
1998
IEEE
15 years 1 months ago
High-Performance External Computations Using User-Controllable I/O
The UPIO (User-controllable Parallel I/O) we proposed xtends the abstraction of a linear file model into an n-dimensional file model, making it possible to control the layout of d...
Jang Sun Lee, Sung Hoon Ko, Sanjay Ranka, Byung Eu...
BMCBI
2010
175views more  BMCBI 2010»
14 years 9 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
SBACPAD
2003
IEEE
120views Hardware» more  SBACPAD 2003»
15 years 2 months ago
Comparison of Genomes Using High-Performance Parallel Computing
Comparison of the DNA sequences and genes of two genomes can be useful to investigate the common functionalities of the corresponding organisms and get a better understanding of h...
Nalvo F. Almeida Jr., Carlos E. R. Alves, Edson C&...
CGO
2007
IEEE
15 years 4 months ago
Exploiting Narrow Accelerators with Data-Centric Subgraph Mapping
The demand for high performance has driven acyclic computation accelerators into extensive use in modern embedded and desktop architectures. Accelerators that are ideal from a sof...
Amir Hormati, Nathan Clark, Scott A. Mahlke
FPL
2007
Springer
138views Hardware» more  FPL 2007»
15 years 3 months ago
Bringing High-Performance Reconfigurable Computing to Exact Computations
Numerical non-robustness is a recurring phenomenon in scientific computing. It is primarily caused by numerical errors arising because of fixed-precision arithmetic in integer and...
Esam El-Araby, Ivan Gonzalez, Tarek A. El-Ghazawi