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ECCB
2005
IEEE
15 years 3 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser
91
Voted
PRICAI
2004
Springer
15 years 3 months ago
Computational Methods for Identification of Human microRNA Precursors
MicroRNA (miRNA), one of non-coding RNAs (ncRNAs), regulates gene expression directly by arresting the messenger RNA (mRNA) translation, which is important for identifying putative...
Jin-Wu Nam, Wha-Jin Lee, Byoung-Tak Zhang
GECCO
2010
Springer
191views Optimization» more  GECCO 2010»
15 years 2 months ago
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of sma
Recent advances in genotyping technology have led to the generation of an enormous quantity of genetic data. Traditional methods of statistical analysis have proved insufficient i...
Emily Rose Holzinger, Carrie C. Buchanan, Scott M....
70
Voted
KDD
1998
ACM
140views Data Mining» more  KDD 1998»
15 years 1 months ago
Blurring the Distinction between Command and Data in Scientific KDD
We have been working on two different KDD systems for scientific data. One system involves comparative genomics, where the database contains more than 60,000 plant gene and protei...
John V. Carlis, Elizabeth Shoop, Scott Krieger
DILS
2008
Springer
14 years 11 months ago
VisGenome and Ensembl: Usability of Integrated Genome Maps
It is not always clear how best to represent integrated data sets, and which application and database features allow a scientist to take best advantage of data coming from various ...
Joanna Jakubowska, Ela Hunt, John McClure, Matthew...