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» Homomorphism-Homogeneous Relational Structures
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103
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AINA
2008
IEEE
15 years 7 months ago
Protein Structure Comparison and Alignment Using Residue Contexts
We introduce a method for comparing protein structures using the notion of residue contexts based on protein Cα-atom backbones. The residue context is derived from the set of vec...
Tobias Sayre, Rahul Singh
BIBE
2008
IEEE
102views Bioinformatics» more  BIBE 2008»
15 years 7 months ago
Motifs in regulatory networks and their structural robustness
: If we consider the regulatory networks used in systems biology (especially in neural and genetic networks), we observe certain regularities in their architecture, namely the occu...
Adrien Elena, Hedi Ben Amor, N. Glade, Jacques Dem...
111
Voted
AAIM
2007
Springer
145views Algorithms» more  AAIM 2007»
15 years 7 months ago
Improved Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots
We study three closely related problems motivated by the prediction of RNA secondary structures with arbitrary pseudoknots: the MAXIMUM BASE PAIR STACKINGS problem proposed by Ieon...
Minghui Jiang
117
Voted
ECWEB
2007
Springer
144views ECommerce» more  ECWEB 2007»
15 years 7 months ago
Structural and Semantic Similarity Metrics for Web Service Matchmaking
Service matchmaking is the process of finding appropriate services for a given set of requirements. We present a novel service matchmaking approach based on the internal process o...
Akin Günay, Pinar Yolum
ESOP
2007
Springer
15 years 7 months ago
Structured Communication-Centred Programming for Web Services
This paper relates two different paradigms of descriptions of communication behaviour, one focussing on global message flows and another on end-point behaviours, using formal cal...
Marco Carbone, Kohei Honda, Nobuko Yoshida