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BMCBI
2005
94views more  BMCBI 2005»
15 years 3 months ago
A method for finding single-nucleotide polymorphisms with allele frequencies in sequences of deep coverage
Background: The allele frequencies of single-nucleotide polymorphisms (SNPs) are needed to select an optimal subset of common SNPs for use in association studies. Sequence-based m...
Jianmin Wang, Xiaoqiu Huang
BIBM
2010
IEEE
286views Bioinformatics» more  BIBM 2010»
15 years 2 months ago
Evaluation of short read metagenomic assembly
Advances in sequencing technologies have equipped researchers with the ability to sequence the collective genome of entire microbial communities commonly referred to as metagenomi...
Anveshi Charuvaka, Huzefa Rangwala
ERCIMDL
2007
Springer
87views Education» more  ERCIMDL 2007»
15 years 10 months ago
Thesaurus-Based Feedback to Support Mixed Search and Browsing Environments
We propose and evaluate a query expansion mechanism that supports searching and browsing in collections of annotated documents. Based on generative language models, our feedback me...
Edgar Meij, Maarten de Rijke
141
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NAR
2000
117views more  NAR 2000»
15 years 3 months ago
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences
Expressed sequence tags (ESTs) have provided a first glimpse of the collection of transcribed sequences in a variety of organisms. However, a careful analysis of this sequence dat...
John Quackenbush, Feng Liang, Ingeborg Holt, Geo P...
PKDD
2010
Springer
143views Data Mining» more  PKDD 2010»
15 years 1 months ago
A Unified Approach to Active Dual Supervision for Labeling Features and Examples
Abstract. When faced with the task of building accurate classifiers, active learning is often a beneficial tool for minimizing the requisite costs of human annotation. Traditional ...
Josh Attenberg, Prem Melville, Foster J. Provost