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BMCBI
2008
115views more  BMCBI 2008»
15 years 3 months ago
Probe signal correction for differential methylation hybridization experiments
Background: Non-biological signal (or noise) has been the bane of microarray analysis. Hybridization effects related to probe-sequence composition and DNA dye-probe interactions h...
Dustin P. Potter, Pearlly Yan, Tim Hui-Ming Huang,...
BMCBI
2006
138views more  BMCBI 2006»
15 years 3 months ago
Approximation properties of haplotype tagging
Background: Single nucleotide polymorphisms (SNPs) are locations at which the genomic sequences of population members differ. Since these differences are known to follow patterns,...
Staal A. Vinterbo, Stephan Dreiseitl, Lucila Ohno-...
JCB
2002
87views more  JCB 2002»
15 years 3 months ago
The Repetitive Sequence Database and Mining Putative Regulatory Elements in Gene Promoter Regions
At least 43% of the human genome is occupied by repetitive elements. Moreover, around 51% of the rice genome is occupied by repetitive elements. The analysis of repetitive element...
Jorng-Tzong Horng, Hsien-Da Huang, Ming-Hui Jin, L...
NAR
2007
115views more  NAR 2007»
15 years 3 months ago
PReMod: a database of genome-wide mammalian cis-regulatory module predictions
We describe PReMod, a new database of genomewide cis-regulatory module (CRM) predictions for both the human and the mouse genomes. The prediction algorithm, described previously i...
Vincent Ferretti, Christian Poitras, Dominique Ber...
SDM
2009
SIAM
105views Data Mining» more  SDM 2009»
16 years 1 months ago
Exploiting Semantic Constraints for Estimating Supersenses with CRFs.
The annotation of words and phrases by ontology concepts is extremely helpful for semantic interpretation. However many ontologies, e.g. WordNet, are too fine-grained and even hu...
Gerhard Paaß, Frank Reichartz