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» I-TASSER server for protein 3D structure prediction
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NAR
2007
100views more  NAR 2007»
14 years 9 months ago
PIC: Protein Interactions Calculator
Interactions within a protein structure and interactions between proteins in an assembly are essential considerations in understanding molecular basis of stability and functions o...
K. G. Tina, R. Bhadra, N. Srinivasan
BIOINFORMATICS
2005
68views more  BIOINFORMATICS 2005»
14 years 10 months ago
GOR V server for protein secondary structure prediction
Taner Z. Sen, Robert L. Jernigan, Jean Garnier, An...
MAGS
2007
168views more  MAGS 2007»
14 years 10 months ago
Agent-based protein structure prediction
A protein is identified by a finite sequence of amino acids, each of them chosen from a set of 20 elements. The Protein Structure Prediction Problem is the problem of predicting...
Luca Bortolussi, Agostino Dovier, Federico Fogolar...
BMCBI
2008
138views more  BMCBI 2008»
14 years 10 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones
BMCBI
2010
120views more  BMCBI 2010»
14 years 10 months ago
Optimal contact definition for reconstruction of Contact Maps
Background: Contact maps have been extensively used as a simplified representation of protein structures. They capture most important features of a protein's fold, being pref...
Jose M. Duarte, Rajagopal Sathyapriya, Henning Ste...