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BMCBI
2008
129views more  BMCBI 2008»
14 years 12 months ago
Triad pattern algorithm for predicting strong promoter candidates in bacterial genomes
Background: Bacterial promoters, which increase the efficiency of gene expression, differ from other promoters by several characteristics. This difference, not yet widely exploite...
Michael Dekhtyar, Amelie Morin, Vehary Sakanyan
CIKM
2005
Springer
15 years 5 months ago
WAM-Miner: in the search of web access motifs from historical web log data
Existing web usage mining techniques focus only on discovering knowledge based on the statistical measures obtained from the static characteristics of web usage data. They do not ...
Qiankun Zhao, Sourav S. Bhowmick, Le Gruenwald
BMCBI
2006
153views more  BMCBI 2006»
14 years 12 months ago
The 3of5 web application for complex and comprehensive pattern matching in protein sequences
Background: The identification of patterns in biological sequences is a key challenge in genome analysis and in proteomics. Frequently such patterns are complex and highly variabl...
Markus Seiler, Alexander Mehrle, Annemarie Poustka...
ANCS
2007
ACM
15 years 3 months ago
Optimization of pattern matching algorithm for memory based architecture
Due to the advantages of easy re-configurability and scalability, the memory-based string matching architecture is widely adopted by network intrusion detection systems (NIDS). In...
Cheng-Hung Lin, Yu-Tang Tai, Shih-Chieh Chang
BMCBI
2007
99views more  BMCBI 2007»
14 years 12 months ago
Statistical significance of cis-regulatory modules
Background: It is becoming increasingly important for researchers to be able to scan through large genomic regions for transcription factor binding sites or clusters of binding si...
Dustin E. Schones, Andrew D. Smith, Michael Q. Zha...