Sciweavers

239 search results - page 14 / 48
» Identification of design motifs with pattern matching algori...
Sort
View
BMCBI
2011
14 years 6 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
BMCBI
2010
115views more  BMCBI 2010»
14 years 12 months ago
Importance of replication in analyzing time-series gene expression data: Corticosteroid dynamics and circadian patterns in rat l
Background: Microarray technology is a powerful and widely accepted experimental technique in molecular biology that allows studying genome wide transcriptional responses. However...
Tung T. Nguyen, Richard R. Almon, Debra C. DuBois,...
SNPD
2003
15 years 1 months ago
Pattern Matching of Parallel Values in Bulk Synchronous Parallel ML
We have designed a functional data-parallel language called BSML for programming bulk-synchronous parallel (BSP) algorithms in so-called direct mode. In a directmode BSP algorithm...
Frédéric Gava, Frédéri...
ALENEX
2011
416views Algorithms» more  ALENEX 2011»
14 years 3 months ago
Exact Pattern Matching with Feed-Forward Bloom Filters
This paper presents an algorithm for exact pattern matching based on a new type of Bloom filter that we call a feed-forward Bloom filter. Besides filtering the input corpus, a ...
Iulian Moraru, David G. Andersen
ANCS
2005
ACM
15 years 5 months ago
Fast and scalable pattern matching for content filtering
High-speed packet content inspection and filtering devices rely on a fast multi-pattern matching algorithm which is used to detect predefined keywords or signatures in the packe...
Sarang Dharmapurikar, John W. Lockwood