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IISWC
2008
IEEE
15 years 8 months ago
A workload for evaluating deep packet inspection architectures
—High-speed content inspection of network traffic is an important new application area for programmable networking systems, and has recently led to several proposals for high-per...
Michela Becchi, Mark A. Franklin, Patrick Crowley
BMCBI
2010
167views more  BMCBI 2010»
15 years 2 months ago
Creating PWMs of transcription factors using 3D structure-based computation of protein-DNA free binding energies
Background: Knowledge of transcription factor-DNA binding patterns is crucial for understanding gene transcription. Numerous DNA-binding proteins are annotated as transcription fa...
Denitsa Alamanova, Philip Stegmaier, Alexander E. ...
BMCBI
2010
142views more  BMCBI 2010»
15 years 2 months ago
Classification of protein sequences by means of irredundant patterns
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Matteo Comin, Davide Verzotto
ICCAD
2003
IEEE
193views Hardware» more  ICCAD 2003»
15 years 7 months ago
FROSTY: A Fast Hierarchy Extractor for Industrial CMOS Circuits
: This paper presents FROSTY, a computer program for automatically extracting the hierarchy of a large-scale digital CMOS circuit from its transistor-level netlist description and ...
Lei Yang, C.-J. Richard Shi
DATE
2004
IEEE
119views Hardware» more  DATE 2004»
15 years 5 months ago
MINCE: Matching INstructions Using Combinational Equivalence for Extensible Processor
Designing custom-extensible instructions for Extensible Processors1 is a computationally complex task because of the large design space. The task of automatically matching candida...
Newton Cheung, Sri Parameswaran, Jörg Henkel,...