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BMCBI
2005
78views more  BMCBI 2005»
14 years 11 months ago
PREP-Mt: predictive RNA editor for plant mitochondrial genes
Background: In plants, RNA editing is a process that converts specific cytidines to uridines and uridines to cytidines in transcripts from virtually all mitochondrial protein-codi...
Jeffrey P. Mower
BMCBI
2006
95views more  BMCBI 2006»
14 years 12 months ago
XcisClique: analysis of regulatory bicliques
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
ICSE
2003
IEEE-ACM
15 years 12 months ago
Whole Program Path-Based Dynamic Impact Analysis
Impact analysis, determining when a change in one part of a program affects other parts of the program, is timeconsuming and problematic. Impact analysis is rarely used to predict...
James Law, Gregg Rothermel
PE
2008
Springer
108views Optimization» more  PE 2008»
14 years 11 months ago
Rate-optimal schemes for Peer-to-Peer live streaming
In this paper we consider the problem of sending data in real time from information sources to sets of receivers, using peer-to-peer communications. We consider several models of ...
Laurent Massoulié, Andrew Twigg
PAM
2010
Springer
15 years 6 months ago
Toward Topology Dualism: Improving the Accuracy of AS Annotations for Routers
Abstract. To describe, analyze, and model the topological and structural characteristics of the Internet, researchers use Internet maps constructed at the router or autonomous syst...
Bradley Huffaker, Amogh Dhamdhere, Marina Fomenkov...