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» Identifying Graph Automorphisms Using Determining Sets
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BMCBI
2010
137views more  BMCBI 2010»
14 years 12 months ago
Improving pairwise sequence alignment accuracy using near-optimal protein sequence alignments
Background: While the pairwise alignments produced by sequence similarity searches are a powerful tool for identifying homologous proteins - proteins that share a common ancestor ...
Michael L. Sierk, Michael E. Smoot, Ellen J. Bass,...
PAKDD
2010
ACM
222views Data Mining» more  PAKDD 2010»
15 years 4 months ago
Online Sampling of High Centrality Individuals in Social Networks
In this work, we investigate the use of online or “crawling” algorithms to sample large social networks in order to determine the most influential or important individuals wit...
Arun S. Maiya, Tanya Y. Berger-Wolf
DKE
2007
116views more  DKE 2007»
14 years 11 months ago
A concurrent rule scheduling algorithm for active rules
The use of rules in a distributed environment creates new challenges for the development of active rule execution models. In particular, since a single event can trigger multiple ...
Ying Jin, Susan Darling Urban, Suzanne W. Dietrich
BMCBI
2007
104views more  BMCBI 2007»
14 years 12 months ago
Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation
Background: The translational efficiency of an mRNA can be modulated by upstream open reading frames (uORFs) present in certain genes. A uORF can attenuate translation of the main...
Marija Cvijovic, Daniel Dalevi, Elizabeth Bilsland...
CIBCB
2006
IEEE
15 years 6 months ago
A Novel Graphical Model Approach to Segmenting Cell Images
— Successful biological image analysis usually requires satisfactory segmentations to identify regions of interest as an intermediate step. Here we present a novel graphical mode...
Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, R...