Conditional random fields (CRF) are widely used for predicting output variables that have some internal structure. Most of the CRF research has been done on structured classificati...
Background: Incorrectly annotated sequence data are becoming more commonplace as databases increasingly rely on automated techniques for annotation. Hence, there is an urgent need...
Ontologies play a prominent role on the Semantic Web. They make possible the widespread publication of machine understandable data, opening myriad opportunities for automated info...
AnHai Doan, Jayant Madhavan, Pedro Domingos, Alon ...
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Dimensionality reduction via feature projection has been widely used in pattern recognition and machine learning. It is often beneficial to derive the projections not only based o...