Numerous genomic annotations are currently stored in different web-accessible databanks that scientists need to mine with user-defined queries and in a batch mode to orderly integ...
Marco Masseroli, Andrea Stella, Natalia Meani, Myr...
Knowledge extraction from online repositories such as PubMed holds the promise of dramatically speeding up biomedical research and drug design. After initially focusing on recogni...
Many important algorithms in computational biology and related subjects rely on the ability to extract and to identify sub-graphs of larger graphs; an example is to find common fun...
In biological sequence processing, Multiple Sequence Alignment (MSA) techniques capture information about long-distance dependencies and the three-dimensional structure of protein ...
Background: Codon bias is believed to play an important role in the control of gene expression. In Escherichia coli, some rare codons, which can limit the expression level of exog...