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BMCBI
2008
133views more  BMCBI 2008»
14 years 9 months ago
CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated
Background: The identification of transcription factor binding sites is difficult since they are only a small number of nucleotides in size, resulting in large numbers of false po...
Matthew S. Hestand, Michiel van Galen, Michel P. V...
BMCBI
2007
99views more  BMCBI 2007»
14 years 9 months ago
Identifying allosteric fluctuation transitions between different protein conformational states as applied to Cyclin Dependent Ki
Background: The mechanisms underlying protein function and associated conformational change are dominated by a series of local entropy fluctuations affecting the global structure ...
Jenny Gu, Philip E. Bourne
83
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BMCBI
2008
110views more  BMCBI 2008»
14 years 9 months ago
Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands
Background: Hypermethylation of promoter CpG islands is strongly correlated to transcriptional gene silencing and epigenetic maintenance of the silenced state. As well as its role...
Wei Dai, Jens M. Teodoridis, Janet Graham, Constan...
ICPR
2006
IEEE
15 years 10 months ago
Learning Policies for Efficiently Identifying Objects of Many Classes
Viola and Jones (VJ) cascade classification methods have proven to be very successful in detecting objects belonging to a single class -- e.g., faces. This paper addresses the mor...
Ahmed M. Elgammal, Ramana Isukapalli, Russell Grei...
MSR
2010
ACM
14 years 11 months ago
Identifying security bug reports via text mining: An industrial case study
-- A bug-tracking system such as Bugzilla contains bug reports (BRs) collected from various sources such as development teams, testing teams, and end users. When bug reporters subm...
Michael Gegick, Pete Rotella, Tao Xie