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BMCBI
2007
166views more  BMCBI 2007»
14 years 9 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
102
Voted
BMCBI
2004
142views more  BMCBI 2004»
14 years 9 months ago
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
Background: Microarray and other high-throughput technologies are producing large sets of interesting genes that are difficult to analyze directly. Bioinformatics tools are needed...
Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Sno...
CONEXT
2005
ACM
14 years 11 months ago
Location based placement of whole distributed systems
The high bandwidth and low latency of the modern internet has made possible the deployment of distributed computing platforms. The XenoServer platform provides a distributed compu...
David Spence, Jon Crowcroft, Steven Hand, Timothy ...
ICDM
2006
IEEE
166views Data Mining» more  ICDM 2006»
15 years 3 months ago
Mining Generalized Graph Patterns Based on User Examples
There has been a lot of recent interest in mining patterns from graphs. Often, the exact structure of the patterns of interest is not known. This happens, for example, when molecu...
Pavel Dmitriev, Carl Lagoze
BMCBI
2008
134views more  BMCBI 2008»
14 years 9 months ago
Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
Background: Utilization of alternative initiation sites for protein translation directed by non-AUG codons in mammalian mRNAs is observed with increasing frequency. Alternative in...
Jill L. Wegrzyn, Thomas M. Drudge, Faramarz Valafa...