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DNA
2008
Springer
15 years 1 months ago
A Simple DNA Gate Motif for Synthesizing Large-Scale Circuits
The prospects of programming molecular systems to perform complex autonomous tasks has motivated research into the design of synthetic biochemical circuits. Of particular interest ...
Lulu Qian, Erik Winfree
PLDI
2005
ACM
15 years 5 months ago
Formal loop merging for signal transforms
A critical optimization in the domain of linear signal transforms, such as the discrete Fourier transform (DFT), is loop merging, which increases data locality and reuse and thus ...
Franz Franchetti, Yevgen Voronenko, Markus Pü...
BMCBI
2010
143views more  BMCBI 2010»
14 years 11 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
94
Voted
PVM
2005
Springer
15 years 5 months ago
New User-Guided and ckpt-Based Checkpointing Libraries for Parallel MPI Applications
We present design and implementation details as well as performance results for two new parallel checkpointing libraries developed by us for parallel MPI applications. The first o...
Pawel Czarnul, Marcin Fraczak
112
Voted
ISSRE
2000
IEEE
15 years 4 months ago
Building Trust into OO Components Using a Genetic Analogy
Despite the growing interest for component-based systems, few works tackle the question of the trust we can bring into a component. This paper presents a method and a tool for bui...
Benoit Baudry, Vu Le Hanh, Jean-Marc Jéz&ea...