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130
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BIBE
2008
IEEE
15 years 7 months ago
2008
IEEE
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
116
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BMCBI
2004
15 years 11 days ago
2004
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
151
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FPL
2010
Springer
14 years 10 months ago
2010
Springer
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
SAC
2005
ACM
15 years 6 months ago
2005
ACM
Peer-to-peer (P2P) has become an important computing model because of its adaptation, self-organization and autonomy etc. But efficient organization of the nodes in P2P networks i...
105
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IWCC
1999
IEEE
15 years 4 months ago
1999
IEEE
The recent improvements in workstation and interconnection network performance have popularized the clusters of off-the-shelf workstations. However, the usefulness of these cluste...