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» Implementing Java on Clusters
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BMCBI
2005
253views more  BMCBI 2005»
15 years 16 days ago
The Use of Edge-Betweenness Clustering to Investigate Biological Function in Protein Interaction Networks
Background: This paper describes an automated method for finding clusters of interconnected proteins in protein interaction networks and retrieving protein annotations associated ...
Ruth Dunn, Frank Dudbridge, Christopher M. Sanders...
HIPC
2009
Springer
14 years 10 months ago
Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
ICDE
2009
IEEE
156views Database» more  ICDE 2009»
16 years 2 months ago
Online Anomaly Prediction for Robust Cluster Systems
In this paper, we present a stream-based mining algorithm for online anomaly prediction. Many real-world applications such as data stream analysis requires continuous cluster opera...
Xiaohui Gu, Haixun Wang
103
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IPPS
1999
IEEE
15 years 4 months ago
Low-Latency Message Passing on Workstation Clusters using SCRAMNet
Clusters of workstations have emerged as a popular platform for parallel and distributed computing. Commodity high speed networks which are used to connect workstation clusters pr...
Vijay Moorthy, Matthew G. Jacunski, Manoj Pillai, ...
BMCBI
2010
175views more  BMCBI 2010»
15 years 22 days ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng