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ISMB
1994
15 years 6 months ago
High Speed Pattern Matching in Genetic Data Base with Reconfigurable Hardware
Homologydetection in large data bases is probably the most time consuming operation in molecular genetic computing systems. Moreover, the progresses made all around the world conc...
Eric Lemoine, Joël Quinqueton, Jean Sallantin
ICFP
2010
ACM
15 years 6 months ago
Lazy tree splitting
Nested data-parallelism (NDP) is a declarative style for programming irregular parallel applications. NDP languages provide language features favoring the NDP style, efficient com...
Lars Bergstrom, Mike Rainey, John H. Reppy, Adam S...
TGIS
2010
137views more  TGIS 2010»
15 years 3 months ago
Semantic Enablement for Spatial Data Infrastructures
Building on abstract reference models, the Open Geospatial Consortium (OGC) has established standards for storing, discovering, and processing geographical information. These stan...
Krzysztof Janowicz, Sven Schade, Arne Bröring...
IPPS
2010
IEEE
15 years 3 months ago
Scalable multi-pipeline architecture for high performance multi-pattern string matching
Multi-pattern string matching remains a major performance bottleneck in network intrusion detection and anti-virus systems for high-speed deep packet inspection (DPI). Although Aho...
Weirong Jiang, Yi-Hua Edward Yang, Viktor K. Prasa...
IPPS
2010
IEEE
15 years 3 months ago
Optimization of linked list prefix computations on multithreaded GPUs using CUDA
We present a number of optimization techniques to compute prefix sums on linked lists and implement them on multithreaded GPUs using CUDA. Prefix computations on linked structures ...
Zheng Wei, Joseph JáJá