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RECOMB
2010
Springer
15 years 6 months ago
naiveBayesCall: An Efficient Model-Based Base-Calling Algorithm for High-Throughput Sequencing
Immense amounts of raw instrument data (i.e., images of fluorescence) are currently being generated using ultra high-throughput sequencing platforms. An important computational cha...
Wei-Chun Kao, Yun S. Song
COMGEO
2004
ACM
15 years 4 months ago
A local search approximation algorithm for k-means clustering
In k-means clustering we are given a set of n data points in d-dimensional space d and an integer k, and the problem is to determine a set of k points in d , called centers, to mi...
Tapas Kanungo, David M. Mount, Nathan S. Netanyahu...
157
Voted
GECCO
2004
Springer
164views Optimization» more  GECCO 2004»
15 years 10 months ago
Fuzzy Dominance Based Multi-objective GA-Simplex Hybrid Algorithms Applied to Gene Network Models
Hybrid algorithms that combine genetic algorithms with the Nelder-Mead simplex algorithm have been effective in solving certain optimization problems. In this article, we apply a s...
Praveen Koduru, Sanjoy Das, Stephen Welch, Judith ...
161
Voted
MSO
2003
15 years 5 months ago
Simulation based Development of Efficient Hardware for Sort based Algorithms
The use of sub-optimal digital systems can at times lead to high speed, efficient, costeffective structures that are sufficient to perform needed tasks. We describe here a system ...
Niklas Hansson, Jay H. Harris
199
Voted
TVLSI
2010
14 years 11 months ago
C-Pack: A High-Performance Microprocessor Cache Compression Algorithm
Microprocessor designers have been torn between tight constraints on the amount of on-chip cache memory and the high latency of off-chip memory, such as dynamic random access memor...
Xi Chen, Lei Yang, Robert P. Dick, Li Shang, Haris...