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BMCBI
2005
125views more  BMCBI 2005»
14 years 11 months ago
DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
Amarendran R. Subramanian, Jan Weyer-Menkhoff, Mic...
ASPLOS
1994
ACM
15 years 3 months ago
Compiler Optimizations for Improving Data Locality
In the past decade, processor speed has become significantly faster than memory speed. Small, fast cache memories are designed to overcome this discrepancy, but they are only effe...
Steve Carr, Kathryn S. McKinley, Chau-Wen Tseng
PLDI
2005
ACM
15 years 5 months ago
Automatic pool allocation: improving performance by controlling data structure layout in the heap
This paper describes Automatic Pool Allocation, a transformation framework that segregates distinct instances of heap-based data structures into seperate memory pools and allows h...
Chris Lattner, Vikram S. Adve
SEDE
2008
15 years 1 months ago
Improving Fuzzy Algorithms for Automatic Magnetic Resonance Image Segmentation
: In this paper, we present reliable algorithms for fuzzy k-means and C-means that could improve MRI segmentation. Since the k-means or FCM method aims to minimize the sum of squar...
Ennumeri A. Zanaty, Sultan Aljahdali, Narayan C. D...
PREMI
2005
Springer
15 years 5 months ago
Parallel Island Model for Attribute Reduction
Abstract. We develop a framework for parallel computation of the optimal rough set decision reducts from data. We adapt the island model for evolutionary computing. The idea is to ...
Mohammad M. Rahman, Dominik Slezak, Jakub Wroblews...