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108
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IJSWIS
2007
171views more  IJSWIS 2007»
15 years 11 days ago
Experience in Aligning Anatomical Ontologies
An ontology is a formal representation of a domain modeling the entities in the domain and their relations. When a domain is represented by multiple ontologies, there is need for ...
Songmao Zhang, Olivier Bodenreider
BMCBI
2010
103views more  BMCBI 2010»
15 years 17 days ago
MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
Background: Sequence alignment is one of the most important techniques to analyze biological systems. It is also true that the alignment is not complete and we have to develop it ...
Toshihide Hara, Keiko Sato, Masanori Ohya
120
Voted
NAR
2006
119views more  NAR 2006»
15 years 12 days ago
HHsenser: exhaustive transitive profile search using HMM-HMM comparison
HHsenser is the first server to offer exhaustive intermediate profile searches, which it combines with pairwise comparison of hidden Markov models. Starting from a single protein ...
Johannes Söding, Michael Remmert, Andreas Bie...
102
Voted
SEMWEB
2010
Springer
14 years 10 months ago
One Size Does Not Fit All: Customizing Ontology Alignment Using User Feedback
Abstract. A key problem in ontology alignment is that different ontological features (e.g., lexical, structural or semantic) vary widely in their importance for different ontology ...
Songyun Duan, Achille Fokoue, Kavitha Srinivas
104
Voted
BMCBI
2005
125views more  BMCBI 2005»
15 years 10 days ago
Multiple sequence alignments of partially coding nucleic acid sequences
Background: High quality sequence alignments of RNA and DNA sequences are an important prerequisite for the comparative analysis of genomic sequence data. Nucleic acid sequences, ...
Roman R. Stocsits, Ivo L. Hofacker, Claudia Fried,...